| Gene ID | Contig3334_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At3g53610: ATRAB8 (HF=2e-53) |
| Module size | 6 genes |
| NF | 0.80 |
| %ile | 96.8 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 98.1 | 0.96 | Contig3334_at | Contig3334 | - | - | 2e-53 | At3g53610 | ATRAB8 | O.I. | H.G. | S.X. | |
| 0.91 | 98.1 | 0.95 | Contig3335_at | Contig3335 | - | - | 3e-67 | At5g59840 | Ras-related GTP-binding family protein | O.I. | H.G. | S.X. | |
| 0.83 | 94.0 | 0.96 | Contig3332_at | Contig3332 | - | - | 2e-1 | At3g21215 | RNA-binding protein, putative | O.I. | H.G. | S.X. | |
| 0.80 | 92.5 | 0.96 | Contig3337_at | Contig3337 | - | - | 5e-50 | At5g59840 | Ras-related GTP-binding family protein | O.I. | H.G. | S.X. | |
| 0.63 | 80.3 | 0.96 | Contig16423_at | Contig16423 | - | - | 2e+0 | At3g02580 | STE1 (STEROL 1) | O.I. | H.G. | S.X. | |
| 0.36 | 47.1 | 0.96 | HA06i14r_s_at | HA06i14r | - | - | 8e-4 | At5g15650 | RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 7.6 | 98.6 | GSM282031 | Malting_day1_Harrington_rep1 | GSE11200 | Expression data from malting barley seeds | |
| 5.8 | 97.8 | GSM238430 | Embryo 25DAF; Seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 5.5 | 97.6 | GSM238431 | Embryo 25DAF; Seed development; Rep 2 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 4.3 | 96.4 | GSM238432 | Embryo 0 h; Seed germination; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 4.0 | 96.0 | GSM238434 | Embryo 24 h; Seed germination; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 3.9 | 95.8 | GSM238428 | Embryo 16DAF; Seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 3.7 | 95.5 | GSM282030 | Malting_day4_Harrington_rep2 | GSE11200 | Expression data from malting barley seeds | |
| 3.6 | 95.3 | GSM238438 | Embryo 72 h; Seed germination; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 3.5 | 95.1 | GSM382237 | Root_Control3 | GSE15295 | Mercury toxicity in barley roots | |
| 3.4 | 94.8 | GSM238435 | Embryo 24 h; Seed germination; Rep 2 | GSE9365 | Expression data from barley maturing and germinating grains | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.81 | 94.8 | Os05g0461300 | At3g53610 | - | Ras-related protein Rab-8A (Oncogene c-mel) | 4e-48 | At3g53610 | ATRAB8 | O.I. | H.G. | S.X. | |
| 0.70 | 88.4 | Os08g0248900 | At3g53610 | - | ADP-ribosylation factor 3 | 2e-46 | At2g24765 | ARF3 (ADP-RIBOSYLATION FACTOR 3) | O.I. | H.G. | S.X. | |
| 0.64 | 83.4 | Os03g0355600 | At3g53610 | - | Adapter-related protein complex 1 beta 1 subunit(Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit)(Clathrin assembly protein complex 1 beta large chain).Splice isoform B | 0 | At4g23460 | beta-adaptin, putative | O.I. | H.G. | S.X. | |
| 0.62 | 81.5 | Os05g0556100 | At3g53610 | - | SDL5A | 1e-43 | At3g61760 | ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1B) | O.I. | H.G. | S.X. | |
| 0.61 | 81.2 | Os04g0502200 | At3g53610 | - | Conserved hypothetical protein | 1e-7 | At5g11040 | - | O.I. | H.G. | S.X. | |
| 0.60 | 79.7 | Os06g0568000 | At3g53610 | - | Nonaspanin (TM9SF) family protein | 4e-107 | At3g13772 | endomembrane protein 70, putative | O.I. | H.G. | S.X. | |
| 0.56 | 76.3 | Os03g0227000 | At3g53610 | - | Coatomer gamma subunit (Gamma-coat protein)(Gamma-COP) | 1e-25 | At4g34450 | coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os11g0181100 | At3g53610 | - | Nonaspanin (TM9SF) family protein | 2e-70 | At1g10950 | endomembrane protein 70, putative | O.I. | H.G. | S.X. | |
| 0.49 | 64.4 | Os02g0537900 | At3g53610 | - | Vacuolar-type H+-translocating inorganicpyrophosphatase (EC 3.6.1.1) | 5e-87 | At1g16780 | vacuolar-type H+-translocating inorganic pyrophosphatase, putative | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os08g0554900 | At3g53610 | - | Nonaspanin (TM9SF) family protein | 2e-39 | At5g10840 | endomembrane protein 70, putative | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | Os07g0657200 | At3g53610 | - | WD40-like domain containing protein | 3e-8 | At3g63460 | WD-40 repeat family protein | O.I. | H.G. | S.X. | |
| 0.40 | 51.1 | Os03g0804300 | At3g53610 | - | Huntingtin-interacting protein 14 | 6e-14 | At3g60800 | zinc finger (DHHC type) family protein | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | Os02g0297600 | At3g53610 | - | Protein of unknown function DUF707 family protein | 8e-20 | At1g67850 | unknown protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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