Co-expression analysis

Gene ID Contig319_at
Gene name
Homology with ArabidopsisSimilar to At5g02500: HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) (HF=2e-48)
Module size 10 genes
NF 0.32
%ile 43.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.70.82Contig319_atContig319--2e-48At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.5268.30.81Contig3199_atContig3199--7e+0At4g17850-O.I.H.G.S.X.
0.4458.90.80Contig3198_x_atContig3198--6e+0At5g25940early nodulin-relatedO.I.H.G.S.X.
0.3342.60.88Contig6949_atContig6949--2e+0At2g25230MYB100 (myb domain protein 100)O.I.H.G.S.X.
0.3138.60.85rbaal31j11_s_atrbaal31j11--1e+0At4g20410GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN)O.I.H.G.S.X.
0.2935.50.87Contig9301_atContig9301--3e-2At1g14860atnudt18 (Arabidopsis thaliana Nudix hydrolase homolog 18)O.I.H.G.S.X.
0.2528.90.87Contig14721_atContig14721--5e+0At4g15670glutaredoxin family proteinO.I.H.G.S.X.
0.2326.10.88Contig8396_atContig8396--6e+0At3g20910NF-YA9 (NUCLEAR FACTOR Y, SUBUNIT A9)O.I.H.G.S.X.
0.2122.60.85Contig406_atContig406--2e+0At5g42100ATBG_PAPO.I.H.G.S.X.
0.2021.10.85Contig3498_atContig3498--7e-59At5g06360ribosomal protein S8e family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.298.7GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.198.4GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.298.0GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.797.7GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.697.7GSM398281Moroc9-75_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
5.597.6GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
4.796.9GSM398282Moroc9-75_5d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.696.8GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
4.596.7GSM261042before 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.296.3GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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