Co-expression analysis

Gene ID	Contig3160_at
Gene name
Homology with Arabidopsis	Similar to At3g14650: CYP72A11 (HF=1e-5)
Module size	6 genes
NF	0.66
%ile	87.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.92	Contig3160_at	Contig3160	-	-	1e-5	At3g14650	CYP72A11	O.I.	H.G.	S.X.	Please select
0.73	88.7	0.90	Contig3152_at	Contig3152	-	-	2e-5	At5g39110	germin-like protein, putative	O.I.	H.G.	S.X.	Please select
0.73	88.7	0.92	Contig3156_s_at	Contig3156	-	-	5e-2	At5g39190	GER2 (GERMIN-LIKE PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.89	Contig19934_at	Contig19934	-	-	1e+0	At1g65484	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.93	Contig3157_at	Contig3157	-	-	1e-2	At5g38950	germin-like protein-related	O.I.	H.G.	S.X.	Please select
0.38	49.5	0.91	Contig10864_at	Contig10864	-	-	5e+0	At5g38520	hydrolase, alpha/beta fold family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.5	98.6	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.4	98.5	GSM372981	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.3	98.5	GSM382234	Root_Hg3	GSE15295	Mercury toxicity in barley roots
7.0	98.4	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
6.3	98.1	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
6.1	98.0	GSM372982	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.1	98.0	GSM372987	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.5	97.6	GSM372988	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.1	97.3	GSM372964	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.1	97.3	GSM373003	genotype: 11542 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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