Co-expression analysis

Gene ID	Contig2_s_at
Gene name	plasma membrane proton ATPase
Homology with Arabidopsis	Similar to At2g07560: AHA6 (Arabidopsis H(+)-ATPase 6) (HF=3e-4)
Module size	6 genes
NF	0.60
%ile	82.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	84.7	0.93	Contig2_s_at	Contig2	plasma membrane proton ATPase	-	3e-4	At2g07560	AHA6 (Arabidopsis H(+)-ATPase 6)	O.I.	H.G.	S.X.	Please select
0.91	98.1	0.92	HO06I09S_at	HO06I09S	-	-	3e+0	At4g33925	unknown protein	O.I.	H.G.	S.X.	Please select
0.83	94.0	0.93	HV06K22u_at	HV06K22u	-	-	9e+0	At3g49645	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.95	HV10P15u_at	HV10P15u	-	-	3e+0	At2g28725	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	61.0	0.94	Contig17521_at	Contig17521	-	-	2e+0	At5g40930	TOM20-4 (TRANSLOCASE OF OUTER MEMBRANE 20-4)	O.I.	H.G.	S.X.	Please select
0.26	30.4	0.93	Contig5424_at	Contig5424	-	-	6e-1	At1g80400	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.1	98.9	GSM282040	Malting_kilned_Morex_rep2	GSE11200	Expression data from malting barley seeds
8.0	98.7	GSM215729	gibberellin plus Yariv-reagent treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
6.4	98.1	GSM282038	Malting_kilned_Morex_rep1	GSE11200	Expression data from malting barley seeds
6.0	97.9	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
4.5	96.7	GSM215727	Control (DMSO) treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
3.6	95.3	GSM161148	7% SWC rep3	GSE6990	Barley drought stress
3.4	94.8	GSM282036	Malting_steeped_Morex_rep2	GSE11200	Expression data from malting barley seeds
3.3	94.6	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.1	94.1	GSM372955	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.9	93.4	GSM215730	Control (DMSO) treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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