Co-expression analysis

Gene ID	Contig2878_at
Gene name
Homology with Arabidopsis	Similar to At3g49630: 2-oxoacid-dependent oxidase, putative (HF=4e-1)
Module size	6 genes
NF	0.55
%ile	75.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.90	Contig2878_at	Contig2878	-	-	4e-1	At3g49630	2-oxoacid-dependent oxidase, putative	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.90	Contig4809_at	Contig4809	-	-	9e-2	At1g64370	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.90	Contig18125_at	Contig18125	-	-	2e-6	At4g13250	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.91	HF11O19r_at	HF11O19r	-	-	8e-5	At3g25140	QUA1 (QUASIMODO 1)	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.88	HV_CEb0011B08r2_at	HV_CEb0011B08r2	-	-	4e+0	At3g61880	CYP78A9 (CYTOCHROME P450 78A9)	O.I.	H.G.	S.X.	Please select
0.35	45.1	0.88	Contig8778_s_at	Contig8778	-	-	2e-2	At3g10185	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.0	98.7	GSM372954	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.4	98.1	GSM372955	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.8	97.8	GSM372953	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.4	96.6	GSM372951	genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.4	96.6	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
4.3	96.4	GSM372973	genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.3	96.4	GSM160744	drought control rep2	GSE6990	Barley drought stress
3.7	95.5	GSM160815	drought control rep3	GSE6990	Barley drought stress
3.6	95.3	GSM261021	ABA-Control-rep1	GSE10328	ABA experiment
3.6	95.3	GSM372952	genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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