Co-expression analysis

Gene ID Contig2790_s_at
Gene name thaumatin-like protein TLP7
Homology with ArabidopsisSimilar to At1g75040: PR5 (PATHOGENESIS-RELATED GENE 5) (HF=3e-1)
Module size 8 genes
NF 0.67
%ile 88.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.10.77Contig2790_s_atContig2790thaumatin-like protein TLP7-3e-1At1g75040PR5 (PATHOGENESIS-RELATED GENE 5)O.I.H.G.S.X.
0.8694.80.83Contig22115_atContig22115--7e-2At4g24960ATHVA22DO.I.H.G.S.X.
0.6784.70.77Contig2212_s_atContig2212Pathogenesis-related protein 1-4e+0At4g25790allergen V5/Tpx-1-related family proteinO.I.H.G.S.X.
0.6784.70.81Contig12050_atContig12050--4e+0At5g54740protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.5572.00.90Contig22098_atContig22098--4e-2At1g01020ARV1O.I.H.G.S.X.
0.5572.00.91Contig22141_s_atContig22141--3e+0At3g07440unknown proteinO.I.H.G.S.X.
0.4356.40.83Contig11775_atContig11775--4e-1At5g61230ankyrin repeat family proteinO.I.H.G.S.X.
0.4053.10.90Contig2994_atContig2994--9e-11At1g32470glycine cleavage system H protein, mitochondrial, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.795.5GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.695.3GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.394.6GSM146373Golden Promise shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.194.1GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
2.993.4GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
2.893.1GSM146379Maythorpe shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
2.893.1GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
2.591.9GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
2.591.9GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
2.591.9GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage