Co-expression analysis

Gene ID Contig2717_at
Gene name
Homology with ArabidopsisSimilar to At5g48570: peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative (HF=5e-12)
Module size 6 genes
NF 0.65
%ile 86.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.86Contig2717_atContig2717--5e-12At5g48570peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putativeO.I.H.G.S.X.
0.7388.70.87Contig2718_s_atContig2718--4e-27At3g25230ROF1 (ROTAMASE FKBP 1)O.I.H.G.S.X.
0.7388.70.89HVSMEb0006I05f_x_atHVSMEb0006I05f--8e-1At5g19930integral membrane family proteinO.I.H.G.S.X.
0.5572.00.89Contig6431_atContig6431--3e-1At2g18110elongation factor 1-beta, putative / EF-1-beta, putativeO.I.H.G.S.X.
0.5066.90.90Contig6433_atContig6433--5e-1At5g66460(1-4)-beta-mannan endohydrolase, putativeO.I.H.G.S.X.
0.4458.90.90Contig5728_atContig5728--1e-15At3g06483PDK (PYRUVATE DEHYDROGENASE KINASE)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.098.4GSM398281Moroc9-75_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
6.898.3GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.597.6GSM398280Moroc9-75_3d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
5.397.4GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.997.1GSM440974Stressed awn_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.796.9GSM398282Moroc9-75_5d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.796.9GSM398279Moroc9-75_3d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.796.9GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.696.8GSM398258Martin_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.196.2GSM398260Martin_5d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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