Co-expression analysis

Gene ID Contig2672_at
Gene name xyloglucan xyloglucosyl transferase
Homology with ArabidopsisSimilar to At4g25810: XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6) (HF=2e-3)
Module size 6 genes
NF 0.81
%ile 97.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.91Contig2672_atContig2672xyloglucan xyloglucosyl transferase-2e-3At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)O.I.H.G.S.X.
0.8394.00.89Contig2681_atContig2681--2e-14At1g02305cathepsin B-like cysteine protease, putativeO.I.H.G.S.X.
0.7790.80.89EBem10_SQ005_L23_x_atEBem10_SQ005_L23--7e+0At5g0385040S ribosomal protein S28 (RPS28B)O.I.H.G.S.X.
0.7388.70.88HVSMEf0009F19r2_atHVSMEf0009F19r2--4e+0At4g28397-O.I.H.G.S.X.
0.7388.70.90Contig2673_atContig2673--1e-17At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)O.I.H.G.S.X.
0.5369.70.89Contig8710_atContig8710--7e+0At5g37520unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.898.9GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
8.598.8GSM215728gibberellin treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
6.598.2GSM261028ABA-Late-rep2GSE10328ABA experimentLink to GEO
6.097.9GSM311263kara_without_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
6.097.9GSM261029ABA-Late-rep3GSE10328ABA experimentLink to GEO
5.997.9GSM261026ABA-Early-rep3GSE10328ABA experimentLink to GEO
5.997.9GSM261027ABA-Late-rep1GSE10328ABA experimentLink to GEO
5.497.5GSM261024ABA-Early-rep1GSE10328ABA experimentLink to GEO
5.397.4GSM261025ABA-Early-rep2GSE10328ABA experimentLink to GEO
4.897.0GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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