Co-expression analysis

Gene ID Contig2671_at
Gene name
Homology with ArabidopsisSimilar to At4g25820: XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9) (HF=4e-8)
Module size 6 genes
NF 0.86
%ile 98.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.88Contig2671_atContig2671--4e-8At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)O.I.H.G.S.X.
0.9198.10.88HVSMEf0009F19r2_atHVSMEf0009F19r2--4e+0At4g28397-O.I.H.G.S.X.
0.7790.80.89EBem10_SQ005_L23_x_atEBem10_SQ005_L23--7e+0At5g0385040S ribosomal protein S28 (RPS28B)O.I.H.G.S.X.
0.7388.70.91Contig2672_atContig2672xyloglucan xyloglucosyl transferase-2e-3At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)O.I.H.G.S.X.
0.6784.70.90Contig2673_atContig2673--1e-17At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)O.I.H.G.S.X.
0.6784.70.92Contig2681_atContig2681--2e-14At1g02305cathepsin B-like cysteine protease, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.698.2GSM261028ABA-Late-rep2GSE10328ABA experimentLink to GEO
6.198.0GSM261029ABA-Late-rep3GSE10328ABA experimentLink to GEO
6.198.0GSM261026ABA-Early-rep3GSE10328ABA experimentLink to GEO
6.198.0GSM311263kara_without_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
5.997.9GSM261027ABA-Late-rep1GSE10328ABA experimentLink to GEO
5.697.7GSM261024ABA-Early-rep1GSE10328ABA experimentLink to GEO
5.597.6GSM261025ABA-Early-rep2GSE10328ABA experimentLink to GEO
5.097.2GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
4.796.9GSM261038Dicktoo-subzero-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
4.396.4GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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