Co-expression analysis

Gene ID	Contig2640_s_at
Gene name
Homology with Arabidopsis	Similar to At1g05010: EFE (ETHYLENE-FORMING ENZYME) (HF=3e-20)
Module size	6 genes
NF	0.22
%ile	27.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	61.0	0.93	Contig2640_s_at	Contig2640	-	-	3e-20	At1g05010	EFE (ETHYLENE-FORMING ENZYME)	O.I.	H.G.	S.X.	Please select
0.35	45.1	0.93	Contig19617_at	Contig19617	-	-	2e+0	At5g55320	membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related	O.I.	H.G.	S.X.	Please select
0.24	27.2	0.93	Contig17657_at	Contig17657	-	-	3e+0	At5g25750	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	18.2	0.93	HV_CEb0011H11r2_x_at	HV_CEb0011H11r2	-	-	3e+0	At1g34640	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	11.6	0.93	Contig16357_at	Contig16357	-	-	4e-5	At2g45530	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.11	9.4	0.93	Contig14638_at	Contig14638	-	-	4e-35	At4g30800	40S ribosomal protein S11 (RPS11B)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.3	98.8	GSM398250	Martin_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.9	97.9	GSM398249	Martin_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.5	97.6	GSM363463	5 mM B(OH)3 treatment (5B) - rep1	GSE14521	Late response to boron toxicity in barley leaves
4.8	97.0	GSM398253	Martin_1d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.7	96.9	GSM398251	Martin_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.0	96.0	GSM398252	Martin_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.9	95.8	GSM398258	Martin_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.6	95.3	GSM363464	5 mM B(OH)3 treatment (5B) - rep2	GSE14521	Late response to boron toxicity in barley leaves
3.3	94.6	GSM363461	Control (C) - rep2	GSE14521	Late response to boron toxicity in barley leaves
3.2	94.3	GSM382236	Root_Control2	GSE15295	Mercury toxicity in barley roots

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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