Co-expression analysis

Gene ID	Contig26387_at
Gene name
Homology with Arabidopsis	Similar to At4g33840: glycosyl hydrolase family 10 protein (HF=5e-2)
Module size	7 genes
NF	0.25
%ile	31.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	84.7	0.92	Contig26387_at	Contig26387	-	-	5e-2	At4g33840	glycosyl hydrolase family 10 protein	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.96	Contig13514_at	Contig13514	-	-	2e+0	At3g49690	MYB84 (MYB DOMAIN PROTEIN 84)	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.94	Contig10270_at	Contig10270	-	-	4e+0	At3g23650	protein kinase-related	O.I.	H.G.	S.X.	Please select
0.22	24.2	0.94	HU11D17u_s_at	HU11D17u	-	-	4e+0	At5g50250	31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putative	O.I.	H.G.	S.X.	Please select
0.22	24.2	0.95	rbags16l24_at	rbags16l24	-	-	5e+0	At5g10830	embryo-abundant protein-related	O.I.	H.G.	S.X.	Please select
0.19	19.6	0.94	Contig2290_s_at	Contig2290	-	-	2e-18	At2g19740	60S ribosomal protein L31 (RPL31A)	O.I.	H.G.	S.X.	Please select
0.11	9.4	0.94	Contig8180_at	Contig8180	-	-	5e-2	At5g47090	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.1	99.7	GSM261042	before 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
15.8	99.6	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
13.5	99.5	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
12.5	99.4	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
8.4	98.8	GSM261043	before 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.0	98.4	GSM261044	before 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.0	93.8	GSM261076	Albina e-16 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.6	92.3	GSM261069	Albina f-17 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.3	90.9	GSM261068	Albina f-17 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.2	90.3	GSM431546	pathogen isolates: Mock - rep1	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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