Co-expression analysis

Gene ID Contig2636_s_at
Gene name
Homology with ArabidopsisSimilar to At1g12010: 1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative (HF=7e-7)
Module size 10 genes
NF 0.53
%ile 74.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.92Contig2636_s_atContig2636--7e-7At1g120101-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putativeO.I.H.G.S.X.
0.6784.70.93Contig12027_atContig12027ORG4-2e-3At2g06010ORG4 (OBP3-RESPONSIVE GENE 4)O.I.H.G.S.X.
0.6480.90.91HK05P12r_s_atHK05P12r--2e+0At2g06925PLA2-ALPHAO.I.H.G.S.X.
0.6380.30.92Contig5017_s_atContig5017--2e-48At3g62220serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.5268.30.92Contig11957_atContig11957--5e-2At3g48280CYP71A25O.I.H.G.S.X.
0.4661.00.93Contig14348_atContig14348--3e-3At1g71692AGL12 (AGAMOUS-LIKE 12)O.I.H.G.S.X.
0.4661.00.94HY02G07u_atHY02G07u--4e+0At2g28420lactoylglutathione lyase family protein / glyoxalase I family proteinO.I.H.G.S.X.
0.4356.40.92Contig24268_atContig24268--2e+0At5g57345unknown proteinO.I.H.G.S.X.
0.3849.50.92Contig5424_atContig5424--6e-1At1g80400zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3240.30.94HVSMEn0011A10f_x_atHVSMEn0011A10f--2e+0At3g47990zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.099.1GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
4.596.7GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
4.396.4GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.296.3GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.995.8GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
3.695.3GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
3.595.1GSM16082238% SWC rep3GSE6990Barley drought stressLink to GEO
3.595.1GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.494.8GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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