Co-expression analysis

Gene ID Contig26310_at
Gene name
Homology with ArabidopsisSimilar to At5g38800: AtbZIP43 (Arabidopsis thaliana basic leucine-zipper 43) (HF=5e+0)
Module size 6 genes
NF 0.79
%ile 96.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.30.89Contig26310_atContig26310--5e+0At5g38800AtbZIP43 (Arabidopsis thaliana basic leucine-zipper 43)O.I.H.G.S.X.
0.8394.00.89Contig2632_s_atContig2632--4e+0At5g37550unknown proteinO.I.H.G.S.X.
0.7790.80.89Contig4707_x_atContig4707--5e+0At2g35900unknown proteinO.I.H.G.S.X.
0.7790.80.90Contig4710_atContig4710--3e-1At2g17560HMGB4 (HIGH MOBILITY GROUP B 4)O.I.H.G.S.X.
0.7388.70.90HVSMEn0024D12r2_atHVSMEn0024D12r2--5e-1At1g34520long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family proteinO.I.H.G.S.X.
0.5066.90.92Contig5376_atContig5376--3e+0At3g44950glycine-rich proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.895.7GSM238424Endosperm 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.795.5GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.695.3GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM238417Endosperm 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM238416Endosperm 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.093.8GSM261063Xantha s-46 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.093.8GSM238426Endosperm 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.893.1GSM261069Albina f-17 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.792.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
2.692.3GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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