Co-expression analysis

Gene ID Contig26019_at
Gene name
Homology with ArabidopsisSimilar to At2g29650: PHT4 (HF=3e+0)
Module size 8 genes
NF 0.48
%ile 67.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.91HX07O15r_atHX07O15r--4e+0At5g05470EIF2 ALPHAO.I.H.G.S.X.
0.4458.90.90Contig13965_atContig13965--7e+0At5g55056unknown proteinO.I.H.G.S.X.
0.4458.90.91Contig7087_atContig7087--8e-1At3g27160GHS1 (GLUCOSE HYPERSENSITIVE 1)O.I.H.G.S.X.
0.3849.50.92Contig13884_atContig13884--3e-5At2g37510RNA-binding protein, putativeO.I.H.G.S.X.
0.3647.10.91Contig11177_atContig11177--5e-1At5g53730harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinO.I.H.G.S.X.
0.3545.10.91HVSMEg0010O10r2_s_atHVSMEg0010O10r2--8e-1At1g28815unknown proteinO.I.H.G.S.X.
0.3138.60.93Contig14949_atContig14949--3e-2At3g19100calcium-dependent protein kinase, putative / CDPK, putativeO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.497.5GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.895.7GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.494.8GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.394.6GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
3.194.1GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
2.893.1GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
2.893.1GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
2.893.1GSM261053Bonus Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.893.1GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
2.893.1GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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