Co-expression analysis

Gene ID	Contig25368_at
Gene name
Homology with Arabidopsis	Similar to At4g36770: UDP-glycosyltransferase/ transferase, transferring glycosyl groups (HF=8e-2)
Module size	6 genes
NF	0.44
%ile	61.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.36	47.1	0.82	Contig25368_at	Contig25368	-	-	8e-2	At4g36770	UDP-glycosyltransferase/ transferase, transferring glycosyl groups	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.90	HVSMEm0022N13r2_at	HVSMEm0022N13r2	-	-	7e-2	At1g01020	ARV1	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.91	HVSMEm0022L18r2_at	HVSMEm0022L18r2	-	-	3e+0	At4g35900	FD	O.I.	H.G.	S.X.	Please select
0.47	62.2	0.82	Contig3433_x_at	Contig3433	-	-	6e+0	At3g14200	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.87	Contig24846_at	Contig24846	-	-	3e-1	At4g11750	kelch repeat-containing F-box family protein	O.I.	H.G.	S.X.	Please select
0.27	32.1	0.90	HE01K03u_at	HE01K03u	-	-	5e-2	At3g51810	EM1 (LATE EMBRYOGENESIS ABUNDANT 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.9	99.6	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
9.2	99.0	GSM261059	Xantha b-12 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.7	98.6	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.3	98.5	GSM261060	Xantha b-12 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.1	98.4	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.7	97.7	GSM398275	Moroc9-75_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.0	97.2	GSM261066	Xantha s-46 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.9	97.1	GSM261072	Albina f-17 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.8	97.0	GSM398273	Moroc9-75_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.6	96.8	GSM398283	Moroc9-75_5d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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