Co-expression analysis

Gene ID	Contig25340_at
Gene name
Homology with Arabidopsis	Similar to At1g31800: CYP97A3 (CYTOCHROME P450-TYPE MONOOXYGENASE 97A3) (HF=8e-36)
Module size	6 genes
NF	0.52
%ile	72.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.91	Contig25340_at	Contig25340	-	-	8e-36	At1g31800	CYP97A3 (CYTOCHROME P450-TYPE MONOOXYGENASE 97A3)	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.91	Contig13518_at	Contig13518	-	-	3e-12	At5g20490	XIK	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.93	Contig22909_at	Contig22909	-	-	3e-2	At1g20550	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.92	Contig13519_at	Contig13519	-	-	7e-1	At3g14750	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.91	Contig13749_x_at	Contig13749	-	-	1e+0	At1g64295	F-box family protein-related	O.I.	H.G.	S.X.	Please select
0.22	24.2	0.91	HV06K22u_at	HV06K22u	-	-	9e+0	At3g49645	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
24.6	99.8	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
12.5	99.4	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
10.5	99.2	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.4	97.5	GSM398279	Moroc9-75_3d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.3	97.4	GSM372963	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.3	97.4	GSM372980	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.2	97.4	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.9	97.1	GSM372995	genotype: 11542 - pathogen isolates: K1 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.8	97.0	GSM372991	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.8	97.0	GSM398280	Moroc9-75_3d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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