Co-expression analysis

Gene ID Contig2521_s_at
Gene name
Homology with ArabidopsisSimilar to At1g07770: RPS15A (ribosomal protein s15a) (HF=4e-21)
Module size 6 genes
NF 0.45
%ile 63.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.00.95Contig2521_s_atContig2521--4e-21At1g07770RPS15A (ribosomal protein s15a)O.I.H.G.S.X.
0.5066.90.96Contig23368_atContig23368--1e+0At4g14780protein kinase, putativeO.I.H.G.S.X.
0.5066.90.96Contig18432_atContig18432--8e-4At1g15140oxidoreductase NAD-binding domain-containing proteinO.I.H.G.S.X.
0.4053.10.95Contig9724_atContig9724voltage-dependent outwardly rectifying plasma membrane K+ channel KCO1/TPK1-3e-3At5g55630ATKCO1O.I.H.G.S.X.
0.3342.60.95Contig20960_atContig20960--1e+0At5g61130PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1)O.I.H.G.S.X.
0.2427.20.95Contig17788_atContig17788--1e+1At4g11760LCR17 (Low-molecular-weight cysteine-rich 17)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.198.9GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
8.098.7GSM398262HS41-1_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.796.9GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.496.6GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.795.5GSM398265HS41-1_1d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.795.5GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.494.8GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM440968Stressed palea_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.494.8GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.494.8GSM440967Stressed palea_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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