Co-expression analysis

Gene ID Contig25138_at
Gene name
Homology with ArabidopsisSimilar to At1g19740: ATP-dependent protease La (LON) domain-containing protein (HF=3e+0)
Module size 6 genes
NF 0.71
%ile 92.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5572.00.95Contig25138_atContig25138--3e+0At1g19740ATP-dependent protease La (LON) domain-containing proteinO.I.H.G.S.X.
0.9198.10.95Contig25106_atContig25106--4e+0At5g64990AtRABH1a (Arabidopsis Rab GTPase homolog H1a)O.I.H.G.S.X.
0.6784.70.95Contig18315_atContig18315--3e-8At2g18770signal recognition particle bindingO.I.H.G.S.X.
0.6380.30.95Contig19129_atContig19129--2e+0At1g62250unknown proteinO.I.H.G.S.X.
0.6077.30.95Contig23295_atContig23295--5e+0At3g10720pectinesterase, putativeO.I.H.G.S.X.
0.5066.90.96Contig20268_atContig20268--4e-1At5g12140ATCYS1 (A. thaliana cystatin-1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.799.2GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.998.7GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.798.6GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.498.1GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.398.1GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.797.7GSM71151Barke stress and unstress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
5.797.7GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.597.6GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.597.6GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.297.4GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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