Co-expression analysis

Gene ID	Contig24783_at
Gene name
Homology with Arabidopsis	Similar to At5g15460: MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2) (HF=3e-2)
Module size	9 genes
NF	0.22
%ile	26.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.94	98.9	0.94	Contig24783_at	Contig24783	-	-	3e-2	At5g15460	MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.38	49.5	0.96	Contig10161_at	Contig10161	-	-	3e-3	At1g19680	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.23	26.1	0.96	Contig4107_s_at	Contig4107	-	-	2e-1	At1g14450	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	22.6	0.96	Contig12767_at	Contig12767	-	-	2e+0	At4g24660	ATHB22 (HOMEOBOX PROTEIN 22)	O.I.	H.G.	S.X.	Please select
0.20	21.1	0.96	Contig23773_at	Contig23773	-	-	1e+0	At5g14070	ROXY2	O.I.	H.G.	S.X.	Please select
0.20	21.1	0.96	Contig8220_at	Contig8220	-	-	6e-1	At1g33040	NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5)	O.I.	H.G.	S.X.	Please select
0.17	16.9	0.96	Contig6337_at	Contig6337	-	-	2e+0	At3g10640	VPS60.1	O.I.	H.G.	S.X.	Please select
0.16	15.3	0.95	Contig13674_at	Contig13674	-	-	2e+0	At5g17073	unknown protein	O.I.	H.G.	S.X.	Please select
0.07	5.8	0.96	Contig3873_at	Contig3873	-	-	3e-20	At1g01060	LHY (LATE ELONGATED HYPOCOTYL)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
31.7	99.9	GSM238412	Endosperm 4DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
15.3	99.6	GSM238413	Endosperm 4DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
4.8	97.0	GSM372955	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.2	94.3	GSM398273	Moroc9-75_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.0	93.8	GSM372954	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.9	93.4	GSM398282	Moroc9-75_5d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
2.8	93.1	GSM398281	Moroc9-75_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
2.7	92.7	GSM372953	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.5	91.9	GSM261076	Albina e-16 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.4	91.4	GSM398274	Moroc9-75_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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