Co-expression analysis

Gene ID	Contig24657_at
Gene name
Homology with Arabidopsis	Similar to At5g18940: Mo25 family protein (HF=2e-2)
Module size	6 genes
NF	0.60
%ile	82.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.96	Contig24657_at	Contig24657	-	-	2e-2	At5g18940	Mo25 family protein	O.I.	H.G.	S.X.	Please select
0.63	80.3	0.96	Contig3659_at	Contig3659	-	-	3e-7	At4g29060	emb2726 (embryo defective 2726)	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.96	rbaal22l07_s_at	rbaal22l07	vacuolar ATPase B subunit	-	1e-1	At3g44100	MD-2-related lipid recognition domain-containing protein / ML domain-containing protein	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.97	HVSMEg0011K10r2_x_at	HVSMEg0011K10r2	-	-	3e+0	At2g30695	-	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.97	Contig4072_at	Contig4072	-	-	2e+0	At2g31610	40S ribosomal protein S3 (RPS3A)	O.I.	H.G.	S.X.	Please select
0.38	49.5	0.96	rbah59f07_s_at	rbah59f07	-	-	4e+0	At3g24160	PMP (PUTATIVE TYPE 1 MEMBRANE PROTEIN)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.4	97.5	GSM146374	Golden Promise shoot Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.6	96.8	GSM146373	Golden Promise shoot Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.6	96.8	GSM146371	Golden Promise shoot Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.3	96.4	GSM146379	Maythorpe shoot Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.1	96.2	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
3.5	95.1	GSM261027	ABA-Late-rep1	GSE10328	ABA experiment
3.5	95.1	GSM146370	Golden Promise shoot Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.4	94.8	GSM146377	Maythorpe shoot Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.2	94.3	GSM419973	Lemma_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
3.2	94.3	GSM440958	Control lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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