Co-expression analysis

Gene ID Contig24636_at
Gene name
Homology with ArabidopsisSimilar to At5g67490: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.45
%ile 62.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7388.70.96Contig24636_atContig24636--1e+0At5g67490unknown proteinO.I.H.G.S.X.
0.7388.70.94HVSMEm0006C02r2_atHVSMEm0006C02r2--7e-2At5g20920EIF2 BETAO.I.H.G.S.X.
0.7187.10.93HM11O11r_atHM11O11r--4e+0At5g40970unknown proteinO.I.H.G.S.X.
0.6784.70.95HB31O12r_atHB31O12r--7e+0At4g32090galactosyltransferaseO.I.H.G.S.X.
0.5774.90.93Contig13407_s_atContig13407--8e-5At3g49430SRp34a (Ser/Arg-rich protein 34a)O.I.H.G.S.X.
0.1716.90.93Contig24443_atContig24443--1e+0At2g34430LHB1B1O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.999.7GSM282025Control_dryseed_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
18.899.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
15.799.6GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
11.899.3GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
11.599.3GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
7.498.5GSM431551pathogen isolates: Polymyxa graminis - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
7.398.5GSM238420Endosperm 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.198.4GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
6.498.1GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
6.198.0GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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