Co-expression analysis

Gene ID Contig24491_at
Gene name
Homology with ArabidopsisSimilar to At4g08870: arginase, putative (HF=1e+0)
Module size 6 genes
NF 0.19
%ile 23.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.90Contig24491_atContig24491--1e+0At4g08870arginase, putativeO.I.H.G.S.X.
0.4053.10.96rbags21n02_atrbags21n02--3e-1At2g46680ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7)O.I.H.G.S.X.
0.2732.10.96Contig7911_atContig7911--2e-4At4g28400protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.194.1GSM363461Control (C) - rep2GSE14521Late response to boron toxicity in barley leavesLink to GEO
2.993.4GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
2.692.3GSM71142OWB-R stress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
2.591.9GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.591.9GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
2.591.9GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.591.9GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.390.9GSM146366Maythorpe Root Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
2.390.9GSM261043before 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
2.390.9GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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