Co-expression analysis

Gene ID	Contig24491_at
Gene name
Homology with Arabidopsis	Similar to At4g08870: arginase, putative (HF=1e+0)
Module size	6 genes
NF	0.19
%ile	23.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.90	Contig24491_at	Contig24491	-	-	1e+0	At4g08870	arginase, putative	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.96	Contig1138_at	Contig1138	-	-	2e-14	At1g07790	HTB1	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.96	rbags21n02_at	rbags21n02	-	-	3e-1	At2g46680	ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7)	O.I.	H.G.	S.X.	Please select
0.27	32.1	0.96	Contig7911_at	Contig7911	-	-	2e-4	At4g28400	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.22	24.2	0.96	Contig13948_at	Contig13948	-	-	6e-10	At1g14300	binding	O.I.	H.G.	S.X.	Please select
0.04	3.4	0.94	Contig10327_at	Contig10327	-	-	9e-3	At3g01610	CDC48C	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	94.1	GSM363461	Control (C) - rep2	GSE14521	Late response to boron toxicity in barley leaves
2.9	93.4	GSM382237	Root_Control3	GSE15295	Mercury toxicity in barley roots
2.6	92.3	GSM71142	OWB-R stress replicate 1	GSE3170	Barley single feature polymorphisms and drought stress gene expression
2.5	91.9	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
2.5	91.9	GSM382232	Root_Hg1	GSE15295	Mercury toxicity in barley roots
2.5	91.9	GSM440960	Stressed lemma_Rep1	GSE17669	Gene expression in the barley spike during drought stress
2.5	91.9	GSM261076	Albina e-16 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.3	90.9	GSM146366	Maythorpe Root Salt, biological rep 1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
2.3	90.9	GSM261043	before 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
2.3	90.9	GSM382236	Root_Control2	GSE15295	Mercury toxicity in barley roots

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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