Co-expression analysis

Gene ID Contig24340_at
Gene name
Homology with ArabidopsisSimilar to At1g76690: OPR2 (HF=2e-2)
Module size 12 genes
NF 0.43
%ile 59.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5874.90.86Contig24340_atContig24340--2e-2At1g76690OPR2O.I.H.G.S.X.
0.6480.90.90Contig24536_atContig24536--1e-3At5g58010basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.4863.20.88rbaal14c24_atrbaal14c24--1e+0At3g14640CYP72A10O.I.H.G.S.X.
0.4863.20.90Contig15139_atContig15139--9e-2At1g02180ferredoxin-relatedO.I.H.G.S.X.
0.4863.20.92Contig5427_atContig5427--7e-14At2g20900diacylglycerol kinase, putativeO.I.H.G.S.X.
0.4458.90.91HVSMEf0001F16r2_s_atHVSMEf0001F16r2--2e+0At1g64490unknown proteinO.I.H.G.S.X.
0.4458.90.92Contig26151_atContig26151--1e+0At1g49990-O.I.H.G.S.X.
0.4053.10.88Contig19223_atContig19223--3e-1At5g66110metal ion bindingO.I.H.G.S.X.
0.4053.10.91Contig5636_atContig5636--7e-1At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinO.I.H.G.S.X.
0.3545.10.90Contig24145_atContig24145--1e-1At1g33100MATE efflux family proteinO.I.H.G.S.X.
0.2630.40.89HV10D05u_x_atHV10D05u--5e+0At1g30190unknown proteinO.I.H.G.S.X.
0.2122.60.90Contig24930_atContig24930--1e+0At1g22180SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.796.9GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.696.8GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.696.8GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.396.4GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.296.3GSM372953genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.995.8GSM372991genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.995.8GSM372995genotype: 11542 - pathogen isolates: K1 - time: 8 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.795.5GSM372954genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.093.8GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.093.8GSM161200cold treatment rep1GSE6993Barley low temperature stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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