Co-expression analysis

Gene ID Contig24105_at
Gene name
Homology with ArabidopsisSimilar to At2g23150: NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3) (HF=9e-2)
Module size 6 genes
NF 0.51
%ile 71.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4661.00.90Contig24105_atContig24105--9e-2At2g23150NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3)O.I.H.G.S.X.
0.6784.70.91EBro03_SQ007_P24_atEBro03_SQ007_P24--3e+0At1g14400UBC1 (UBIQUITIN CARRIER PROTEIN 1)O.I.H.G.S.X.
0.5066.90.93Contig9147_atContig9147--7e+0At5g38630ACYB-1O.I.H.G.S.X.
0.4458.90.93Contig6213_s_atContig6213--8e-4At1g05850POM1 (POM-POM1)O.I.H.G.S.X.
0.4356.40.93HV_CEb0017C21r2_s_atHV_CEb0017C21r2--9e+0At4g05180PSBQ-2O.I.H.G.S.X.
0.4255.20.90HVSMEb0006O02r2_s_atHVSMEb0006O02r2--9e+0At5g14410unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.299.6GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
15.999.6GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
8.598.8GSM238421Endosperm 0 h; Seed germination Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.898.6GSM238426Endosperm 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.398.5GSM238427Endosperm 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.298.5GSM238420Endosperm 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.798.3GSM71144OWB-R stress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
6.598.2GSM71141OWB-D stress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
6.398.1GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
6.097.9GSM71142OWB-R stress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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