Co-expression analysis

Gene ID Contig23381_at
Gene name
Homology with ArabidopsisSimilar to At3g05327: - (HF=2e+0)
Module size 6 genes
NF 0.36
%ile 49.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.95Contig23381_atContig23381--2e+0At3g05327-O.I.H.G.S.X.
0.6077.30.95Contig7958_atContig7958--7e-8At2g02040PTR2 (PEPTIDE TRANSPORTER 2)O.I.H.G.S.X.
0.4661.00.95HVSMEk0007B01r2_s_atHVSMEk0007B01r2--6e+0At1g12030unknown proteinO.I.H.G.S.X.
0.2326.10.95Contig4090_s_atContig4090triticain beta 2-4e-7At5g43060cysteine proteinase, putative / thiol protease, putativeO.I.H.G.S.X.
0.2122.60.96Contig7830_s_atContig7830--3e-22At2g02860SUT2 (SUCROSE TRANSPORTER 2)O.I.H.G.S.X.
0.2122.60.95Contig3882_s_atContig3882--2e-68At3g18820ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.299.7GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
15.999.6GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
15.399.6GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
11.599.3GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
10.699.2GSM419981Seed_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
10.699.2GSM440975Control seed_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
9.699.0GSM440980Stressed seed_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
6.498.1GSM440979Stressed seed_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
6.097.9GSM419983Seed_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
6.097.9GSM440977Control seed_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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