Co-expression analysis

Gene ID Contig23379_at
Gene name
Homology with ArabidopsisSimilar to At2g02020: proton-dependent oligopeptide transport (POT) family protein (HF=9e-2)
Module size 6 genes
NF 0.30
%ile 38.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.96Contig23379_atContig23379--9e-2At2g02020proton-dependent oligopeptide transport (POT) family proteinO.I.H.G.S.X.
0.4053.10.96Contig5121_s_atContig5121--1e+1At5g47060senescence-associated protein-relatedO.I.H.G.S.X.
0.3647.10.97Contig16455_atContig16455--1e-1At3g46880unknown proteinO.I.H.G.S.X.
0.2528.90.96Contig8811_atContig8811--2e+0At5g26170WRKY50O.I.H.G.S.X.
0.1514.10.96Contig16886_atContig16886--5e+0At5g60460sec61beta family proteinO.I.H.G.S.X.
0.1210.40.96Contig18744_atContig18744--2e+0At5g41630F-box family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.299.1GSM71153Barke stress and unstress replicate 4GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
8.598.8GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
8.398.8GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
8.098.7GSM71151Barke stress and unstress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
7.898.6GSM146361Golden Promise Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
6.998.3GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
6.898.3GSM146367Maythorpe Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
6.798.3GSM146357Golden Promise Root Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
5.797.7GSM146363Maythorpe Root Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
5.797.7GSM146366Maythorpe Root Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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