Co-expression analysis

Gene ID	Contig23110_at
Gene name
Homology with Arabidopsis	Similar to At4g38000: Dof-type zinc finger domain-containing protein (HF=1e+0)
Module size	6 genes
NF	0.81
%ile	97.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.91	Contig23110_at	Contig23110	-	-	1e+0	At4g38000	Dof-type zinc finger domain-containing protein	O.I.	H.G.	S.X.	Please select
0.91	98.1	0.91	Contig1698_at	Contig1698	-	-	2e-7	At3g12120	FAD2 (FATTY ACID DESATURASE 2)	O.I.	H.G.	S.X.	Please select
0.80	92.5	0.94	basd21o15_at	basd21o15	-	-	1e+0	At2g28671	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	87.1	0.91	Contig11403_at	Contig11403	-	-	2e-6	At2g38840	guanylate-binding family protein	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.93	Contig20402_at	Contig20402	-	-	2e-1	At1g52720	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	74.9	0.93	Contig10193_at	Contig10193	-	-	6e+0	At5g59830	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.8	98.3	GSM261076	Albina e-16 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.3	98.1	GSM372954	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.5	97.6	GSM372955	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.6	96.8	GSM261069	Albina f-17 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.6	96.8	GSM372951	genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.5	96.7	GSM261071	Albina f-17 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.3	96.4	GSM261072	Albina f-17 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.3	96.4	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.2	96.3	GSM261068	Albina f-17 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.0	96.0	GSM261070	Albina f-17 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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