Co-expression analysis

Gene ID	Contig22909_at
Gene name
Homology with Arabidopsis	Similar to At1g20550: unknown protein (HF=3e-2)
Module size	6 genes
NF	0.58
%ile	79.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.92	Contig22909_at	Contig22909	-	-	3e-2	At1g20550	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.91	Contig13518_at	Contig13518	-	-	3e-12	At5g20490	XIK	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.91	Contig25340_at	Contig25340	-	-	8e-36	At1g31800	CYP97A3 (CYTOCHROME P450-TYPE MONOOXYGENASE 97A3)	O.I.	H.G.	S.X.	Please select
0.47	62.2	0.90	Contig13519_at	Contig13519	-	-	7e-1	At3g14750	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.92	Contig23202_at	Contig23202	-	-	3e-5	At5g09320	VPS9B	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.92	HG01J06u_at	HG01J06u	-	-	5e+0	At4g24600	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
24.5	99.8	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
12.4	99.4	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
10.4	99.2	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.1	97.3	GSM372963	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.5	96.7	GSM372964	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.4	96.6	GSM398279	Moroc9-75_3d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.4	96.6	GSM372995	genotype: 11542 - pathogen isolates: K1 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.3	96.4	GSM372991	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.2	96.3	GSM398280	Moroc9-75_3d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.2	96.3	GSM398281	Moroc9-75_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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