Co-expression analysis

Gene ID Contig22799_at
Gene name
Homology with ArabidopsisSimilar to At4g32551: LUG (LEUNIG) (HF=1e+0)
Module size 6 genes
NF 0.49
%ile 69.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.95Contig22799_atContig22799--1e+0At4g32551LUG (LEUNIG)O.I.H.G.S.X.
0.7388.70.95Contig21692_atContig21692--3e+0At2g35970harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinO.I.H.G.S.X.
0.7388.70.96Contig8795_atContig8795--6e-1At2g26500cytochrome b6f complex subunit (petM), putativeO.I.H.G.S.X.
0.4356.40.96Contig23686_atContig23686--4e+0At2g10014unknown proteinO.I.H.G.S.X.
0.2528.90.95HU11L10u_s_atHU11L10u--2e+0At1g59865unknown proteinO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.499.9GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.097.9GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.297.4GSM419982Seed_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
5.297.4GSM440976Control seed_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.396.4GSM372962genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.296.3GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
3.895.7GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.795.5GSM261033Dicktoo-chilling-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
3.695.3GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
3.695.3GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1615867_at, orthologous to the query gene, Contig22799_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7390.81615867_atAt4g32551--7e-5At4g32551LUG (LEUNIG)O.I.H.G.S.X.
0.7591.31622020_s_atAt4g32551hypothetical protein LOC100261607-1e-8At4g20260DREPP plasma membrane polypeptide family proteinO.I.H.G.S.X.
0.5375.21613088_atAt4g32551hypothetical protein LOC100262569-5e-1At5g24660LSU2 (RESPONSE TO LOW SULFUR 2)O.I.H.G.S.X.
0.4666.51607534_atAt4g32551hypothetical protein LOC100248163-3e-11At2g38460ATIREG1 (IRON-REGULATED PROTEIN 1)O.I.H.G.S.X.
0.4666.51622431_atAt4g32551hypothetical protein LOC100264392-8e-1At3g06895unknown proteinO.I.H.G.S.X.
0.4464.11616564_atAt4g32551--4e-42At3g26618ERF1-3 (eukaryotic release factor 1-3)O.I.H.G.S.X.
0.4361.51615750_atAt4g32551hypothetical protein LOC100261431-2e+0At5g58787zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3650.71614761_atAt4g32551hypothetical protein LOC100266857-4e+0At1g69920ATGSTU12 (GLUTATHIONE S-TRANSFERASE TAU 12)O.I.H.G.S.X.
0.3650.71608615_atAt4g32551hypothetical protein LOC100255091-2e-33At3g61440CYSC1 (CYSTEINE SYNTHASE C1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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