Co-expression analysis

Gene ID	Contig22529_at
Gene name
Homology with Arabidopsis	Similar to Atcg00740: - (HF=1e-58)
Module size	9 genes
NF	0.22
%ile	27.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.84	94.3	0.92	Contig22529_at	Contig22529	-	-	1e-58	Atcg00740	-	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.94	Contig11890_at	Contig11890	-	-	4e-5	At4g21580	oxidoreductase, zinc-binding dehydrogenase family protein	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.95	Contig22799_at	Contig22799	-	-	1e+0	At4g32551	LUG (LEUNIG)	O.I.	H.G.	S.X.	Please select
0.31	38.6	0.95	Contig15097_at	Contig15097	-	-	3e-1	At5g51720	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	30.4	0.95	Contig8795_at	Contig8795	-	-	6e-1	At2g26500	cytochrome b6f complex subunit (petM), putative	O.I.	H.G.	S.X.	Please select
0.25	28.9	0.93	Contig7793_at	Contig7793	-	-	2e-2	At4g24590	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	28.9	0.94	Contig13046_at	Contig13046	-	-	5e-3	At1g17080	unknown protein	O.I.	H.G.	S.X.	Please select
0.10	8.4	0.93	Contig11247_at	Contig11247	-	-	6e-2	At2g24440	selenium binding	O.I.	H.G.	S.X.	Please select
0.09	7.4	0.93	rbaal31o15_at	rbaal31o15	-	-	3e-1	At1g77650	F-box family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.4	94.8	GSM372962	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.9	93.4	GSM261033	Dicktoo-chilling-rep1	GSE10329	Low temperature stress in cv. Dicktoo
2.8	93.1	GSM238413	Endosperm 4DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
2.8	93.1	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
2.7	92.7	GSM282030	Malting_day4_Harrington_rep2	GSE11200	Expression data from malting barley seeds
2.5	91.9	GSM238409	Pericarp 4DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
2.4	91.4	GSM282039	Malting_day4_Morex_rep2	GSE11200	Expression data from malting barley seeds
2.4	91.4	GSM238408	Pericarp 4DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
2.4	91.4	GSM238415	Endosperm 8DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
2.4	91.4	GSM261076	Albina e-16 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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