Co-expression analysis

Gene ID Contig22516_at
Gene name
Homology with ArabidopsisSimilar to At1g51300: acyl-protein thioesterase-related (HF=4e-1)
Module size 12 genes
NF 0.65
%ile 86.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7489.10.96Contig22516_atContig22516--4e-1At1g51300acyl-protein thioesterase-relatedO.I.H.G.S.X.
0.7589.50.96Contig20455_atContig20455--2e+0At5g48220indole-3-glycerol phosphate synthase, putativeO.I.H.G.S.X.
0.7287.40.96Contig1139_s_atContig1139--1e-19At3g0711060S ribosomal protein L13A (RPL13aA)O.I.H.G.S.X.
0.7086.00.96Contig26597_atContig26597--9e-2At5g47330palmitoyl protein thioesterase family proteinO.I.H.G.S.X.
0.6480.90.96Contig20206_atContig20206--6e-3At1g73010phosphataseO.I.H.G.S.X.
0.6480.90.97HY03E10u_s_atHY03E10u--1e+1At5g63060transporterO.I.H.G.S.X.
0.5975.80.96Contig14264_atContig14264--2e+0At1g48780unknown proteinO.I.H.G.S.X.
0.5874.90.96Contig255_atContig255--4e+0At3g53670unknown proteinO.I.H.G.S.X.
0.5874.90.96Contig18744_atContig18744--2e+0At5g41630F-box family proteinO.I.H.G.S.X.
0.5674.30.96Contig7911_atContig7911--2e-4At4g28400protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.5066.90.96Contig1434_s_atContig1434--2e-1At5g58580ATL63 (ARABIDOPSIS TÓO.I.H.G.S.X.
0.5066.90.97Contig13274_atContig13274--9e-3At1g71690unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.598.8GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
7.398.5GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
6.298.0GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
5.897.8GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.597.6GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.597.6GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.496.6GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
4.496.6GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.196.2GSM146365Maythorpe Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.695.3GSM146364Maythorpe Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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