Co-expression analysis

Gene ID	Contig22141_s_at
Gene name
Homology with Arabidopsis	Similar to At3g07440: unknown protein (HF=3e+0)
Module size	6 genes
NF	0.38
%ile	52.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.89	Contig22141_s_at	Contig22141	-	-	3e+0	At3g07440	unknown protein	O.I.	H.G.	S.X.	Please select
0.83	94.0	0.88	Contig22098_at	Contig22098	-	-	4e-2	At1g01020	ARV1	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.84	Contig22115_at	Contig22115	-	-	7e-2	At4g24960	ATHVA22D	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.86	Contig2994_at	Contig2994	-	-	9e-11	At1g32470	glycine cleavage system H protein, mitochondrial, putative	O.I.	H.G.	S.X.	Please select
0.20	21.1	0.89	HV08D21r_at	HV08D21r	-	-	6e+0	At3g29305	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	11.6	0.88	Contig6578_at	Contig6578	-	-	1e-27	At1g64650	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.8	97.0	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds
4.2	96.3	GSM261021	ABA-Control-rep1	GSE10328	ABA experiment
3.8	95.7	GSM398261	HS41-1_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.7	95.5	GSM146373	Golden Promise shoot Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.2	94.3	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
3.1	94.1	GSM160822	38% SWC rep3	GSE6990	Barley drought stress
3.0	93.8	GSM146379	Maythorpe shoot Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.0	93.8	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.9	93.4	GSM146377	Maythorpe shoot Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
2.9	93.4	GSM160819	38% SWC rep1	GSE6990	Barley drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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