Co-expression analysis

Gene ID Contig22073_at
Gene name
Homology with ArabidopsisSimilar to At3g05937: unknown protein (HF=1e+0)
Module size 8 genes
NF 0.19
%ile 23.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4053.10.81Contig22073_atContig22073--1e+0At3g05937unknown proteinO.I.H.G.S.X.
0.3849.50.80HW04A22u_atHW04A22u--5e+0At1g75280isoflavone reductase, putativeO.I.H.G.S.X.
0.2122.60.84HW08F07V_s_atHW08F07V--2e+0At5g06265hyaluronan mediated motility receptor-relatedO.I.H.G.S.X.
0.2021.10.87HA12O12u_x_atHA12O12u--2e+0At5g08460GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.1716.90.87HVSMEf0019G16r2_s_atHVSMEf0019G16r2--1e+0At1g07750cupin family proteinO.I.H.G.S.X.
0.1514.10.83Contig8965_atContig8965--7e+0At5g28010Bet v I allergen family proteinO.I.H.G.S.X.
0.1311.60.85HA12O12u_atHA12O12u--2e+0At5g08460GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X. proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.998.9GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
7.598.6GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
5.697.7GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
5.297.4GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.595.1GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
3.494.8GSM261025ABA-Early-rep2GSE10328ABA experimentLink to GEO
3.194.1GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.194.1GSM1608317% SWC rep1GSE6990Barley drought stressLink to GEO
3.194.1GSM160815drought control rep3GSE6990Barley drought stressLink to GEO
3.093.8GSM261024ABA-Early-rep1GSE10328ABA experimentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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