Co-expression analysis

Gene ID Contig21945_at
Gene name
Homology with ArabidopsisSimilar to At2g23960: defense-related protein, putative (HF=4e+0)
Module size 7 genes
NF 0.15
%ile 18.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9298.40.93Contig21945_atContig21945--4e+0At2g23960defense-related protein, putativeO.I.H.G.S.X.
0.3545.10.96HV_CEa0012K03r2_x_atHV_CEa0012K03r2--3e+0At2g07215unknown proteinO.I.H.G.S.X.
0.2732.10.96Contig13274_atContig13274--9e-3At1g71690unknown proteinO.I.H.G.S.X.
0.2122.60.95Contig20154_atContig20154--2e-2At1g16440kinaseO.I.H.G.S.X.
0.2122.60.95Contig15477_atContig15477--4e-1At5g14540proline-rich family proteinO.I.H.G.S.X.
0.1311.60.96Contig1434_s_atContig1434--2e-1At5g58580ATL63 (ARABIDOPSIS TÓO.I.H.G.S.X.
0.064.80.94Contig23458_atContig23458--5e+0At5g48950thioesterase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.799.6GSM398274Moroc9-75_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
8.898.9GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
8.098.7GSM398275Moroc9-75_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
6.598.2GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.198.0GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
5.897.8GSM372981genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.197.3GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.897.0GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.696.8GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.296.3GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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