Co-expression analysis

Gene ID Contig21626_at
Gene name
Homology with ArabidopsisSimilar to At5g59440: ZEU1 (ZEUS1) (HF=4e+0)
Module size 6 genes
NF 0.69
%ile 90.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.87Contig21626_atContig21626--4e+0At5g59440ZEU1 (ZEUS1)O.I.H.G.S.X.
0.8092.50.88Contig15721_atContig15721--1e+0At5g59360unknown proteinO.I.H.G.S.X.
0.7388.70.86Contig24429_atContig24429--2e+0At5g39220hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.6380.30.82Contig18_s_atContig18--8e-2At5g25940early nodulin-relatedO.I.H.G.S.X.
0.4458.90.88Contig14721_atContig14721--5e+0At4g15670glutaredoxin family proteinO.I.H.G.S.X.
0.4255.20.88Contig9101_s_atContig9101--7e+0At5g23930mitochondrial transcription termination factor-related / mTERF-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.999.1GSM146358Golden Promise Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
6.398.1GSM146364Maythorpe Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
6.298.0GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
5.497.5GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.997.1GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
4.796.9GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.596.7GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
4.596.7GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
4.496.6GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.296.3GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage