Co-expression analysis

Gene ID Contig21549_at
Gene name
Homology with ArabidopsisSimilar to At3g47050: glycosyl hydrolase family 3 protein (HF=1e-1)
Module size 7 genes
NF 0.47
%ile 65.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6178.70.92Contig21549_atContig21549--1e-1At3g47050glycosyl hydrolase family 3 proteinO.I.H.G.S.X.
0.7388.70.94Contig9782_atContig9782--4e-1At3g02500unknown proteinO.I.H.G.S.X.
0.6784.70.93Contig622_atContig622--2e+0At5g56840DNA-binding family proteinO.I.H.G.S.X.
0.6077.30.94Contig9784_atContig9784--8e-3At5g66090unknown proteinO.I.H.G.S.X.
0.4053.10.93Contig14284_atContig14284--4e-1At4g28240wound-responsive protein-relatedO.I.H.G.S.X.
0.3037.00.94Contig24535_atContig24535--2e-1At3g51220unknown proteinO.I.H.G.S.X.
0.2224.20.94Contig11880_atContig11880--2e+0At2g03110RNA binding / nucleic acid bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.699.7GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
19.499.7GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
18.599.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
18.099.7GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
15.999.6GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.895.7GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.795.5GSM440978Stressed seed_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.695.3GSM161221cold treatment rep3GSE6993Barley low temperature stressLink to GEO
3.595.1GSM440974Stressed awn_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.494.8GSM398258Martin_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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