Co-expression analysis

Gene ID Contig21303_at
Gene name
Homology with ArabidopsisSimilar to At2g14890: AGP9 (ARABINOGALACTAN PROTEIN 9) (HF=2e+0)
Module size 6 genes
NF 0.56
%ile 77.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8092.50.92Contig21303_atContig21303--2e+0At2g14890AGP9 (ARABINOGALACTAN PROTEIN 9)O.I.H.G.S.X.
0.8394.00.92Contig982_atContig982--2e-1At5g20520WAV2 (WAVY GROWTH 2)O.I.H.G.S.X.
0.8092.50.93HVSMEg0015A14r2_atHVSMEg0015A14r2--1e+0At5g03905hesB-like domain-containing proteinO.I.H.G.S.X.
0.4458.90.92HVSMEg0017M01r2_atHVSMEg0017M01r2--5e+0At5g53120SPDS3 (SPERMIDINE SYNTHASE 3)O.I.H.G.S.X.
0.4053.10.93HP01O07w_atHP01O07w--3e+0At5g16490RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4)O.I.H.G.S.X.
0.2427.20.93HVSMEb0005F19r2_atHVSMEb0005F19r2--3e-1At4g09010APX4 (ASCORBATE PEROXIDASE 4)O.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.197.3GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
4.396.4GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
4.396.4GSM440964Control palea_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.396.4GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
4.296.3GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
4.296.3GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
4.096.0GSM238426Endosperm 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.995.8GSM6890627 h salt stressed replicate 3GSE3097Barley1 salinity stress studyLink to GEO
3.895.7GSM261028ABA-Late-rep2GSE10328ABA experimentLink to GEO
3.695.3GSM160744drought control rep2GSE6990Barley drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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