Co-expression analysis

Gene ID	Contig21290_at
Gene name
Homology with Arabidopsis	Similar to At5g01910: unknown protein (HF=2e+0)
Module size	6 genes
NF	0.56
%ile	78.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.95	Contig21290_at	Contig21290	-	-	2e+0	At5g01910	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.97	Contig12682_at	Contig12682	-	-	1e+1	At5g44572	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.95	Contig12171_at	Contig12171	-	-	6e+0	At2g31670	-	O.I.	H.G.	S.X.	Please select
0.46	61.0	0.95	Contig16870_at	Contig16870	-	-	5e-11	At2g36570	leucine-rich repeat transmembrane protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.95	Contig14634_at	Contig14634	-	-	8e-1	At5g26790	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	32.1	0.95	Contig863_s_at	Contig863	-	-	3e-6	At3g02720	DJ-1 family protein / protease-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.4	99.0	GSM419976	Palea_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
9.4	99.0	GSM440964	Control palea_Rep2	GSE17669	Gene expression in the barley spike during drought stress
8.3	98.8	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
6.3	98.1	GSM419977	Palea_Rep3	GSE16754	Comparative transcriptional profiling of organs of the barley spike
6.3	98.1	GSM440965	Control palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
5.6	97.7	GSM419973	Lemma_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
5.6	97.7	GSM440958	Control lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress
5.1	97.3	GSM261076	Albina e-16 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.0	97.2	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.8	97.0	GSM238431	Embryo 25DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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