Co-expression analysis

Gene ID Contig21026_at
Gene name
Homology with ArabidopsisSimilar to At2g30870: GSTF10 (HALIANA GLUTATHIONE S-TRANSFERASE PHI 10) (HF=2e+0)
Module size 6 genes
NF 0.32
%ile 43.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.10.96Contig21026_atContig21026--2e+0At2g30870GSTF10 (HALIANA GLUTATHIONE S-TRANSFERASE PHI 10)O.I.H.G.S.X.
0.6784.70.96Contig10115_atContig10115--7e-1At5g48220indole-3-glycerol phosphate synthase, putativeO.I.H.G.S.X.
0.4661.00.97Contig19027_atContig19027--1e+0At5g05290ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2)O.I.H.G.S.X.
0.4356.40.96Contig21277_atContig21277--8e-12At1g26850dehydration-responsive family proteinO.I.H.G.S.X.
0.2528.90.97Contig16664_atContig16664--3e-8At1g73180eukaryotic translation initiation factor-relatedO.I.H.G.S.X.
0.1412.90.96Contig21045_atContig21045--4e+0At5g51130methyltransferaseO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5774.90.95Contig12965_atContig12965--4e-5At3g14200DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.5369.70.94Contig1978_atContig1978--1e-53At3g11940ATRPS5A (RIBOSOMAL PROTEIN 5A)O.I.H.G.S.X.
0.5066.90.95Contig17772_atContig17772--4e-1At3g57900unknown proteinO.I.H.G.S.X.
0.5066.90.95Contig25830_atContig25830--5e+0At3g14480glycine/proline-rich proteinO.I.H.G.S.X.
0.5066.90.96Contig11674_atContig11674--3e-1At5g49420MADS-box protein (AGL84)O.I.H.G.S.X.
0.5066.90.96Contig18946_atContig18946--1e+0At5g65220ribosomal protein L29 family proteinO.I.H.G.S.X.
0.4661.00.95Contig24925_atContig24925--2e+0At3g27835-O.I.H.G.S.X.
0.4458.90.95Contig8957_atContig8957--1e-41At1g09150pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing proteinO.I.H.G.S.X.
0.4458.90.96Contig5416_s_atContig5416--9e-1At1g51140basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.4458.90.96Contig16251_atContig16251--2e-2At1g74140-O.I.H.G.S.X.
0.4356.40.96Contig10253_atContig10253--3e-1At1g51745-O.I.H.G.S.X.
0.4356.40.97Contig20382_atContig20382--4e-1At1g53910RAP2.12O.I.H.G.S.X.
0.4053.10.94Contig14450_atContig14450--1e+0At1g60090BGLU4 (BETA GLUCOSIDASE 4)O.I.H.G.S.X.
0.4053.10.95Contig26555_atContig26555--1e+0At1g71430unknown proteinO.I.H.G.S.X.
0.4053.10.96Contig12458_atContig12458--2e+0At5g42200zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4053.10.96Contig17679_atContig17679--4e-1At3g14200DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.3849.50.94Contig20582_atContig20582--2e+0At5g38020S-adenosyl-L-methionine:carboxyl methyltransferase family proteinO.I.H.G.S.X.
0.3849.50.94Contig11675_s_atContig11675--2e-10At1g48650helicase domain-containing proteinO.I.H.G.S.X.
0.3849.50.95Contig21025_atContig21025--7e-2At2g16340unknown proteinO.I.H.G.S.X.
0.3647.10.95Contig1035_atContig1035--6e-58At4g02890UBQ14O.I.H.G.S.X.
0.3647.10.95Contig8595_atContig8595--2e-13At3g14930HEME1O.I.H.G.S.X.
0.3647.10.96Contig15852_atContig15852--1e-33At1g29940NRPA2O.I.H.G.S.X.
0.3647.10.97Contig7742_atContig7742--5e-1At1g29330ERD2 (ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2)O.I.H.G.S.X.
0.3545.10.95Contig5521_s_atContig5521--6e-2At5g62810PEX14O.I.H.G.S.X.
0.3443.60.94Contig17046_atContig17046--9e-2At1g61920unknown proteinO.I.H.G.S.X.
0.3342.60.93Contig18677_atContig18677--1e+0At2g31560unknown proteinO.I.H.G.S.X.
0.3342.60.94Contig18471_atContig18471--2e+0At1g76590zinc-binding family proteinO.I.H.G.S.X.
0.3342.60.95Contig24995_atContig24995--1e+0At1g53850PAE1O.I.H.G.S.X.
0.3342.60.95Contig26573_atContig26573--7e-4At1g31260ZIP10 (ZINC TRANSPORTER 10 PRECURSOR)O.I.H.G.S.X.
0.3342.60.95Contig6488_atContig6488--2e+0At3g07410AtRABA5b (Arabidopsis Rab GTPase homolog A5b)O.I.H.G.S.X.
0.3342.60.96HA11I04u_s_atHA11I04u--4e+0At3g06435Expressed proteinO.I.H.G.S.X.
0.3342.60.96Contig15382_atContig15382--7e+0Atmg00550-O.I.H.G.S.X.
0.3138.60.94HVSMEk0003I10r2_atHVSMEk0003I10r2--2e+1At5g44730haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.3138.60.95Contig16959_atContig16959--9e-3At3g48470EMB2423 (EMBRYO DEFECTIVE 2423)O.I.H.G.S.X.
0.3138.60.95Contig21168_atContig21168--2e+0At2g39550PGGT-IO.I.H.G.S.X.
0.3138.60.96Contig14258_atContig14258--5e+0At1g30800-O.I.H.G.S.X.
0.3037.00.95Contig16671_atContig16671--5e-1At1g06190ATP binding / ATPase, coupled to transmembrane movement of ions, phosphorylative mechanismO.I.H.G.S.X.
0.3037.00.95Contig15477_atContig15477--4e-1At5g14540proline-rich family proteinO.I.H.G.S.X.
0.3037.00.95Contig14389_atContig14389--6e-2At1g32470glycine cleavage system H protein, mitochondrial, putativeO.I.H.G.S.X.
0.2935.50.96Contig5897_atContig5897--6e-1At5g27810sequence-specific DNA binding / transcription factorO.I.H.G.S.X.
0.2835.50.96Contig1760_s_atContig1760--2e-9At1g09340CRB (CHLOROPLAST RNA BINDING)O.I.H.G.S.X.
0.2732.10.92Contig1753_atContig1753--1e-12At3g2890060S ribosomal protein L34 (RPL34C)O.I.H.G.S.X.
0.2732.10.95Contig10216_atContig10216--6e-6At1g47500ATRBP47C' (RNA-binding protein 47C')O.I.H.G.S.X.
0.2630.40.95Contig12070_atContig12070--1e-5At1g68850peroxidase, putativeO.I.H.G.S.X.
0.2528.90.94Contig13228_atContig13228--2e-1At5g07360amidase family proteinO.I.H.G.S.X.
0.2528.90.95Contig13542_atContig13542--1e-1At3g46070zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.2528.90.95Contig7760_s_atContig7760--7e-1At3g30350unknown proteinO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.097.9GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
2.993.4GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seedsLink to GEO
2.792.7GSM161221cold treatment rep3GSE6993Barley low temperature stressLink to GEO
2.792.7GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
2.792.7GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
2.792.7GSM372944genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.692.3GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.692.3GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
2.591.9GSM372990genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.591.9GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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