Co-expression analysis

Gene ID Contig21026_at
Gene name
Homology with ArabidopsisSimilar to At2g30870: GSTF10 (HALIANA GLUTATHIONE S-TRANSFERASE PHI 10) (HF=2e+0)
Module size 6 genes
NF 0.32
%ile 43.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.10.96Contig21026_atContig21026--2e+0At2g30870GSTF10 (HALIANA GLUTATHIONE S-TRANSFERASE PHI 10)O.I.H.G.S.X.
0.6784.70.96Contig10115_atContig10115--7e-1At5g48220indole-3-glycerol phosphate synthase, putativeO.I.H.G.S.X.
0.4661.00.97Contig19027_atContig19027--1e+0At5g05290ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2)O.I.H.G.S.X.
0.4356.40.96Contig21277_atContig21277--8e-12At1g26850dehydration-responsive family proteinO.I.H.G.S.X.
0.2528.90.97Contig16664_atContig16664--3e-8At1g73180eukaryotic translation initiation factor-relatedO.I.H.G.S.X.
0.1412.90.96Contig21045_atContig21045--4e+0At5g51130methyltransferaseO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.097.9GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
2.993.4GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seedsLink to GEO
2.792.7GSM161221cold treatment rep3GSE6993Barley low temperature stressLink to GEO
2.792.7GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
2.792.7GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
2.792.7GSM372944genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.692.3GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.692.3GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
2.591.9GSM372990genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.591.9GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.17839.1.S1_at, orthologous to the query gene, Contig21026_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5775.1Zm.17839.1.S1_atAt2g30870glutathione S-transferase2-1e-1At4g02520ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2)O.I.H.G.S.X.
0.7792.1Zm.17741.1.S1_atAt2g30870--4e+0At5g21430DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.7389.9Zm.19222.1.S1_atAt2g30870hypothetical protein LOC100194092-3e-3At4g32720AtLa1 (Arabidopsis thaliana La protein 1)O.I.H.G.S.X.
0.7389.9Zm.16687.1.S1_atAt2g30870hypothetical protein LOC100194066-3e-3At5g07250ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)O.I.H.G.S.X.
0.6785.8Zm.11667.1.A1_atAt2g30870hypothetical protein LOC100274234-4e-1At4g39630unknown proteinO.I.H.G.S.X.
0.4251.3Zm.12842.1.A1_atAt2g30870hydroxyacid oxidase 1-1e-2At3g14415(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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