Co-expression analysis

Gene ID Contig21026_at
Gene name
Homology with ArabidopsisSimilar to At2g30870: GSTF10 (HALIANA GLUTATHIONE S-TRANSFERASE PHI 10) (HF=2e+0)
Module size 6 genes
NF 0.32
%ile 43.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.10.96Contig21026_atContig21026--2e+0At2g30870GSTF10 (HALIANA GLUTATHIONE S-TRANSFERASE PHI 10)O.I.H.G.S.X.
0.6784.70.96Contig10115_atContig10115--7e-1At5g48220indole-3-glycerol phosphate synthase, putativeO.I.H.G.S.X.
0.4661.00.97Contig19027_atContig19027--1e+0At5g05290ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2)O.I.H.G.S.X.
0.4356.40.96Contig21277_atContig21277--8e-12At1g26850dehydration-responsive family proteinO.I.H.G.S.X.
0.2528.90.97Contig16664_atContig16664--3e-8At1g73180eukaryotic translation initiation factor-relatedO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.097.9GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
2.993.4GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seedsLink to GEO
2.792.7GSM161221cold treatment rep3GSE6993Barley low temperature stressLink to GEO
2.792.7GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
2.792.7GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
2.792.7GSM372944genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.692.3GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.692.3GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
2.591.9GSM372990genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.591.9GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.223099.1.S1_at, orthologous to the query gene, Contig21026_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6791.1PtpAffx.223099.1.S1_atAt2g30870hypothetical protein-2e+0At3g03370-O.I.H.G.S.X.
0.4471.9PtpAffx.224739.1.S1_atAt2g30870hypothetical protein-1e-15At5g45650subtilase family proteinO.I.H.G.S.X.
0.4471.9Ptp.7035.1.S1_atAt2g30870hypothetical protein-1e-25At5g11340GCN5-related N-acetyltransferase (GNAT) family proteinO.I.H.G.S.X.
0.3863.7PtpAffx.207081.1.S1_atAt2g30870cation proton exchanger-8e-2At1g08140ATCHX6A (CATION/H+ EXCHANGER 6A)O.I.H.G.S.X.
0.3153.7PtpAffx.108502.1.A1_x_atAt2g30870hypothetical protein-8e-30At3g48030hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2950.5PtpAffx.90645.1.A1_a_atAt2g30870hypothetical protein-6e-16At4g17180glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.2340.5PtpAffx.203436.1.S1_atAt2g30870hypothetical protein-3e+0At2g28710zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.1423.5PtpAffx.216659.1.S1_atAt2g30870hypothetical protein-9e-8At5g59990-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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