Co-expression analysis

Gene ID Contig20974_at
Gene name
Homology with ArabidopsisSimilar to At3g14650: CYP72A11 (HF=7e-6)
Module size 7 genes
NF 0.41
%ile 56.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4458.90.96Contig20974_atContig20974--7e-6At3g14650CYP72A11O.I.H.G.S.X.
0.5572.00.97Contig14904_atContig14904--2e+0At2g28330unknown proteinO.I.H.G.S.X.
0.4661.00.96Contig16886_atContig16886--5e+0At5g60460sec61beta family proteinO.I.H.G.S.X.
0.3950.50.96Contig9392_atContig9392--5e+0At5g62780DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.3342.60.96Contig21935_atContig21935--1e+0At3g49700ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9)O.I.H.G.S.X.
0.3240.30.96Contig9752_atContig9752--3e+0At2g11651unknown proteinO.I.H.G.S.X.
0.2935.50.96Contig13215_atContig13215--3e-10At5g49720ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1)O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6380.30.95Contig12574_atContig12574--2e+0At4g16100unknown proteinO.I.H.G.S.X.
0.6178.70.95Contig17591_atContig17591--1e-8At3g06350MEE32 (MATERNAL EFFECT EMBRYO ARREST 32)O.I.H.G.S.X.
0.5774.90.96Contig112_atContig112--2e-3At5g23950C2 domain-containing proteinO.I.H.G.S.X.
0.5572.00.94Contig25269_atContig25269--1e+0At1g53785unknown proteinO.I.H.G.S.X.
0.5369.70.93HT13J15r_s_atHT13J15r--3e-1At2g15760calmodulin-binding proteinO.I.H.G.S.X.
0.5268.30.95HVSMEg0016M04r2_s_atHVSMEg0016M04r2--9e-5At3g47950AHA4O.I.H.G.S.X.
0.4762.20.95Contig14695_atContig14695--2e-4At5g46780VQ motif-containing proteinO.I.H.G.S.X.
0.4661.00.95Contig2663_atContig2663--3e+0At4g04632ATP binding / protein kinaseO.I.H.G.S.X.
0.4458.90.94Contig22199_atContig22199--9e-2At1g09440protein kinase family proteinO.I.H.G.S.X.
0.4458.90.94Contig15907_atContig15907--1e-1At3g62980TIR1 (TRANSPORT INHIBITOR RESPONSE 1)O.I.H.G.S.X.
0.4458.90.95HU05J10u_s_atHU05J10u--3e+0At4g01915unknown proteinO.I.H.G.S.X.
0.4458.90.96HU10K01u_atHU10K01u--2e-1At2g47780rubber elongation factor (REF) protein-relatedO.I.H.G.S.X.
0.4458.90.94Contig10070_atContig10070--5e-1At1g48690auxin-responsive GH3 family proteinO.I.H.G.S.X.
0.4458.90.95Contig13863_atContig13863--9e-1At1g04778unknown proteinO.I.H.G.S.X.
0.4356.40.95Contig8254_atContig8254--3e+0At5g59300UBC7 (UBIQUITIN CARRIER PROTEIN 7)O.I.H.G.S.X.
0.4053.10.93Contig14236_atContig14236--2e-8At2g26430RCY1 (ARGININE-RICH CYCLIN 1)O.I.H.G.S.X.
0.4053.10.95Contig24771_atContig24771--5e+0At3g01730unknown proteinO.I.H.G.S.X.
0.4053.10.95Contig21722_atContig21722--2e+0At1g55780metal ion bindingO.I.H.G.S.X.
0.4053.10.95Contig10811_atContig10811--1e-1At5g48680sterile alpha motif (SAM) domain-containing proteinO.I.H.G.S.X.
0.3647.10.95HVSMEm0004M18r2_x_atHVSMEm0004M18r2--2e+0At3g09970calcineurin-like phosphoesterase family proteinO.I.H.G.S.X.
0.3647.10.95Contig15384_atContig15384--1e-11At5g55580mitochondrial transcription termination factor family protein / mTERF family proteinO.I.H.G.S.X.
0.3545.10.95HVSMEm0009E24r2_atHVSMEm0009E24r2--4e+0At1g49010myb family transcription factorO.I.H.G.S.X.
0.3545.10.94Contig16959_atContig16959--9e-3At3g48470EMB2423 (EMBRYO DEFECTIVE 2423)O.I.H.G.S.X.
0.3545.10.96Contig8332_atContig8332--2e-8At5g13020emsy N terminus domain-containing protein / ENT domain-containing proteinO.I.H.G.S.X.
0.3342.60.94Contig2465_atContig2465--1e-135At1g20260hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanismO.I.H.G.S.X.
0.3342.60.94Contig26165_atContig26165--2e+1Atmg01060-O.I.H.G.S.X.
0.3342.60.96HVSMEl0014E16r2_s_atHVSMEl0014E16r2--2e+1At4g03210XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9)O.I.H.G.S.X.
0.3240.30.95Contig15038_atContig15038--4e-1At5g14030translocon-associated protein beta (TRAPB) family proteinO.I.H.G.S.X.
0.3240.30.93Contig15807_atContig15807--2e-9At1g79610sodium proton exchanger, putative (NHX6)O.I.H.G.S.X.
0.3138.60.94Contig18351_atContig18351--2e-2At4g08480MAPKKK9O.I.H.G.S.X.
0.3138.60.95rbags16l24_atrbags16l24--5e+0At5g10830embryo-abundant protein-relatedO.I.H.G.S.X.
0.3138.60.95Contig21425_atContig21425--6e+0At5g13340unknown proteinO.I.H.G.S.X.
0.3138.60.95HV11K03u_atHV11K03u--4e+0At3g16370GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.3138.60.95Contig17556_atContig17556--8e+0At5g53940yippee family proteinO.I.H.G.S.X.
0.3138.60.96Contig7170_atContig7170--2e+0At1g32540LOL1 (LSD ONE LIKE 1)O.I.H.G.S.X.
0.3138.60.96Contig15411_atContig15411--2e-4At5g49890CLC-C (CHLORIDE CHANNEL C)O.I.H.G.S.X.
0.3138.60.96Contig21186_atContig21186--1e-1At4g25720QC (GLUTAMINYL CYCLASE)O.I.H.G.S.X.
0.3138.60.96Contig4424_atContig4424--1e-5At5g40150peroxidase, putativeO.I.H.G.S.X.
0.3138.60.96Contig6527_atContig6527--8e-1At3g07350unknown proteinO.I.H.G.S.X.
0.3138.60.97Contig11977_atContig11977--6e-1At5g62490ATHVA22BO.I.H.G.S.X.
0.3037.00.94Contig17639_atContig17639--9e-1At1g12423unknown proteinO.I.H.G.S.X.
0.3037.00.93Contig17680_atContig17680--2e-1At1g58070unknown proteinO.I.H.G.S.X.
0.2935.50.93Contig2539_s_atContig2539--5e+0At4g24300peptidaseO.I.H.G.S.X.
0.2935.50.95EBed02_SQ003_G22_s_atEBed02_SQ003_G22--2e+1At5g23600tRNA 2'phosphotransferase, putativeO.I.H.G.S.X.
0.2935.50.95Contig2342_atContig2342--3e-14At5g0480040S ribosomal protein S17 (RPS17D)O.I.H.G.S.X.
0.2935.50.95Contig14234_atContig14234--4e-1At1g50570C2 domain-containing proteinO.I.H.G.S.X.
0.2935.50.96Contig10592_atContig10592--1e-2At5g26180NOL1/NOP2/sun family proteinO.I.H.G.S.X.
0.2835.50.93Contig8162_atContig8162--2e-10At5g54500FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1)O.I.H.G.S.X.
0.2732.10.95Contig14103_atContig14103--2e-1At4g19040EDR2O.I.H.G.S.X.
0.2732.10.96Contig11766_atContig11766--1e-2At5g50400PAP27 (PURPLE ACID PHOSPHATASE 27)O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.999.2GSM372981genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.197.3GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.897.0GSM373002genotype: 11542 - pathogen isolates: K1 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.895.7GSM372987genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
3.494.8GSM372982genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.294.3GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.194.1GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.093.8GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.993.4GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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