Co-expression analysis

Gene ID Contig20974_at
Gene name
Homology with ArabidopsisSimilar to At3g14650: CYP72A11 (HF=7e-6)
Module size 7 genes
NF 0.41
%ile 56.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4458.90.96Contig20974_atContig20974--7e-6At3g14650CYP72A11O.I.H.G.S.X.
0.5572.00.97Contig14904_atContig14904--2e+0At2g28330unknown proteinO.I.H.G.S.X.
0.4661.00.96Contig16886_atContig16886--5e+0At5g60460sec61beta family proteinO.I.H.G.S.X.
0.3950.50.96Contig9392_atContig9392--5e+0At5g62780DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.3342.60.96Contig21935_atContig21935--1e+0At3g49700ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9)O.I.H.G.S.X.
0.3240.30.96Contig9752_atContig9752--3e+0At2g11651unknown proteinO.I.H.G.S.X.
0.2935.50.96Contig13215_atContig13215--3e-10At5g49720ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.999.2GSM372981genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.197.3GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.897.0GSM373002genotype: 11542 - pathogen isolates: K1 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.895.7GSM372987genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
3.494.8GSM372982genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.294.3GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.194.1GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.093.8GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.993.4GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.14316.1.S1_at, orthologous to the query gene, Contig20974_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6785.8Zm.14316.1.S1_atAt3g14650hypothetical protein LOC100274358 /// hypothetical protein LOC100277073-1e-2At3g14630CYP72A9O.I.H.G.S.X.
0.5976.1Zm.5018.2.A1_a_atAt3g14650hypothetical protein LOC100194303-4e-1At5g49350unknown proteinO.I.H.G.S.X.
0.5775.1Zm.16341.1.S1_atAt3g14650hypothetical protein LOC100278884-1e+0At4g32030unknown proteinO.I.H.G.S.X.
0.4352.8Zm.4072.1.S1_atAt3g14650phosphoribosylanthranilate transferase-2e-6At5g12970C2 domain-containing proteinO.I.H.G.S.X.
0.3844.2Zm.15916.1.S1_atAt3g14650--1e+0At1g62480vacuolar calcium-binding protein-relatedO.I.H.G.S.X.
0.3029.8Zm.15936.1.A1_a_atAt3g14650acidic ribosomal protein P1a-6e-3At5g2451060s acidic ribosomal protein P1, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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