Co-expression analysis

Gene ID Contig2082_x_at
Gene name
Homology with ArabidopsisSimilar to At1g72416: heat shock protein binding (HF=9e-1)
Module size 7 genes
NF 0.07
%ile 9.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7589.50.84Contig2082_x_atContig2082--9e-1At1g72416heat shock protein bindingO.I.H.G.S.X.
0.4458.90.84HVSMEb0015I01r2_atHVSMEb0015I01r2--3e-1At3g53060ASK6 (ARABIDOPSIS SKP1-LIKE 6)O.I.H.G.S.X.
0.1311.60.94Contig10081_atContig10081--2e+0At4g28365plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.054.10.88Contig14547_atContig14547--3e-6At5g49630AAP6 (AMINO ACID PERMEASE 6)O.I.H.G.S.X.
0.043.40.87Contig19391_atContig19391--9e-3At3g01260aldose 1-epimerase/ carbohydrate binding / catalytic/ isomeraseO.I.H.G.S.X.
0.043.40.90Contig1370_atContig1370--2e-18At3g61110ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27)O.I.H.G.S.X.
0.032.60.90Contig8992_atContig8992--5e-11At1g74640unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.697.7GSM398267HS41-1_3d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
5.397.4GSM398262HS41-1_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.897.0GSM398268HS41-1_3d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.796.9GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.396.4GSM398269HS41-1_3d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.396.4GSM398264HS41-1_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.595.1GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.394.6GSM261058Xantha b-12 Cotrol rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.294.3GSM398265HS41-1_1d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.294.3GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage