Co-expression analysis

Gene ID	Contig2082_x_at
Gene name
Homology with Arabidopsis	Similar to At1g72416: heat shock protein binding (HF=9e-1)
Module size	7 genes
NF	0.07
%ile	9.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.75	89.5	0.84	Contig2082_x_at	Contig2082	-	-	9e-1	At1g72416	heat shock protein binding	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.84	HVSMEb0015I01r2_at	HVSMEb0015I01r2	-	-	3e-1	At3g53060	ASK6 (ARABIDOPSIS SKP1-LIKE 6)	O.I.	H.G.	S.X.	Please select
0.13	11.6	0.94	Contig10081_at	Contig10081	-	-	2e+0	At4g28365	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.05	4.1	0.88	Contig14547_at	Contig14547	-	-	3e-6	At5g49630	AAP6 (AMINO ACID PERMEASE 6)	O.I.	H.G.	S.X.	Please select
0.04	3.4	0.87	Contig19391_at	Contig19391	-	-	9e-3	At3g01260	aldose 1-epimerase/ carbohydrate binding / catalytic/ isomerase	O.I.	H.G.	S.X.	Please select
0.04	3.4	0.90	Contig1370_at	Contig1370	-	-	2e-18	At3g61110	ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27)	O.I.	H.G.	S.X.	Please select
0.03	2.6	0.90	Contig8992_at	Contig8992	-	-	5e-11	At1g74640	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.6	97.7	GSM398267	HS41-1_3d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.3	97.4	GSM398262	HS41-1_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.8	97.0	GSM398268	HS41-1_3d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.7	96.9	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
4.3	96.4	GSM398269	HS41-1_3d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.3	96.4	GSM398264	HS41-1_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.5	95.1	GSM215729	gibberellin plus Yariv-reagent treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
3.3	94.6	GSM261058	Xantha b-12 Cotrol rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.2	94.3	GSM398265	HS41-1_1d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.2	94.3	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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