Co-expression analysis

Gene ID Contig2043_s_at
Gene name
Homology with ArabidopsisSimilar to At2g35270: DNA-binding protein-related (HF=1e+0)
Module size 6 genes
NF 0.55
%ile 76.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.80.86Contig2043_s_atContig2043--1e+0At2g35270DNA-binding protein-relatedO.I.H.G.S.X.
0.7187.10.84Contig7083_atContig7083--4e-19At5g37830OXP1 (OXOPROLINASE 1)O.I.H.G.S.X.
0.5975.80.86Contig21949_s_atContig21949--1e+0At5g37660PDLP7 (PLASMODESMATA-LOCATED PROTEIN 7)O.I.H.G.S.X.
0.4458.90.86Contig20580_atContig20580--7e+0At3g18560unknown proteinO.I.H.G.S.X.
0.4255.20.86Contig6997_atContig6997--2e-1At4g39140protein binding / zinc ion bindingO.I.H.G.S.X.
0.3950.50.85Contig14037_atContig14037--5e+0At4g32090galactosyltransferaseO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.296.3GSM261074Albina e-16 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.296.3GSM372982genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.196.2GSM372985genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.096.0GSM261075Albina e-16 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.096.0GSM372988genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.995.8GSM311263kara_without_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
3.895.7GSM372986genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.795.5GSM372981genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM372989genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM372964genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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