Co-expression analysis

Gene ID Contig20287_at
Gene name
Homology with ArabidopsisSimilar to At1g03810: DNA-binding protein-related (HF=6e-1)
Module size 11 genes
NF 0.24
%ile 29.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6380.30.92Contig20287_atContig20287--6e-1At1g03810DNA-binding protein-relatedO.I.H.G.S.X.
0.3747.90.93Contig10495_s_atContig10495--4e-3At3g16190isochorismatase hydrolase family proteinO.I.H.G.S.X.
0.3138.60.92Contig15499_atContig15499--3e-1At1g23950unknown proteinO.I.H.G.S.X.
0.2835.50.93Contig9431_atContig9431--1e-1At1g42990ATBZIP60 (BASIC REGION/LEUCINE ZIPPER MOTIF 60)O.I.H.G.S.X.
0.2528.90.92Contig7905_atContig7905--3e+0At4g37880protein binding / zinc ion bindingO.I.H.G.S.X.
0.2021.10.93Contig15041_atContig15041--2e+0At3g55740PROT2 (PROLINE TRANSPORTER 2)O.I.H.G.S.X.
0.2021.10.93Contig4941_s_atContig4941--3e-2At4g17190FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2)O.I.H.G.S.X.
0.1919.60.92Contig15737_atContig15737--1e-1At3g30370-O.I.H.G.S.X.
0.1919.60.94Contig21290_atContig21290--2e+0At5g01910unknown proteinO.I.H.G.S.X.
0.1716.90.94Contig11605_atContig11605--4e-8At5g47310unknown proteinO.I.H.G.S.X.
0.1514.10.93Contig8406_atContig8406--4e-2At3g10040transcription factorO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.399.3GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.196.2GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.795.5GSM398249Martin_0d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.695.3GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM398251Martin_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.294.3GSM215728gibberellin treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
2.993.4GSM398250Martin_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
2.893.1GSM398258Martin_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
2.792.7GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
2.792.7GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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