Co-expression analysis

Gene ID Contig20086_s_at
Gene name
Homology with ArabidopsisSimilar to At5g57570: - (HF=1e+0)
Module size 6 genes
NF 0.46
%ile 63.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5975.80.94Contig20086_s_atContig20086--1e+0At5g57570-O.I.H.G.S.X.
0.5066.90.95Contig7267_atContig7267--1e-3At5g07460PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2)O.I.H.G.S.X.
0.5066.90.95Contig21692_atContig21692--3e+0At2g35970harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinO.I.H.G.S.X.
0.4762.20.94Contig13204_atContig13204--6e-1At2g03570unknown proteinO.I.H.G.S.X.
0.3849.50.94Contig9680_atContig9680--6e-2At3g23050IAA7 (INDOLE-3-ACETIC ACID 7)O.I.H.G.S.X.
0.2935.50.94Contig8795_atContig8795--6e-1At2g26500cytochrome b6f complex subunit (petM), putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.697.7GSM311255hsp5_with_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
4.997.1GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.496.6GSM372962genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.396.4GSM372968genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.096.0GSM261033Dicktoo-chilling-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
3.394.6GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.394.6GSM311254hsp5_with_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
3.394.6GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.294.3GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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