Co-expression analysis

Gene ID Contig19685_at
Gene name
Homology with ArabidopsisSimilar to At1g64010: serpin, putative / serine protease inhibitor, putative (HF=2e+0)
Module size 13 genes
NF 0.47
%ile 66.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6178.70.95Contig19685_atContig19685--2e+0At1g64010serpin, putative / serine protease inhibitor, putativeO.I.H.G.S.X.
0.5572.00.96Contig14607_atContig14607--2e+0At4g37440unknown proteinO.I.H.G.S.X.
0.5066.90.96Contig7815_s_atContig7815--2e-5At5g48930HCT (HYDROXYCINNAMOYL-COA SHIKIMATE/QUINATE HYDROXYCINNAMOYL TRANSFERASE)O.I.H.G.S.X.
0.5066.90.97Contig7044_atContig7044--4e-3At5g42090-O.I.H.G.S.X.
0.4863.20.96Contig11010_atContig11010--4e-6At3g11960cleavage and polyadenylation specificity factor (CPSF) A subunit C-terminal domain-containing proteinO.I.H.G.S.X.
0.4762.20.96Contig24881_s_atContig24881--5e-2At1g75340zinc finger (CCCH-type) family proteinO.I.H.G.S.X.
0.4661.00.96Contig5311_atContig5311O-methyltransferase-7e-1At1g62900O-methyltransferase, putativeO.I.H.G.S.X.
0.4661.00.96Contig20475_atContig20475--2e+0At2g23067unknown proteinO.I.H.G.S.X.
0.4559.30.96Contig12827_atContig12827--8e-1At2g27470NF-YB11 (NUCLEAR FACTOR Y, SUBUNIT B11)O.I.H.G.S.X.
0.4153.90.96Contig9932_atContig9932--6e-7At5g03530RABC2A (RAB GTPASE HOMOLOG C2A)O.I.H.G.S.X.
0.4153.90.96Contig16812_atContig16812--3e+0At4g23770unknown proteinO.I.H.G.S.X.
0.3849.50.97Contig5857_s_atContig5857--2e-1At1g02965unknown proteinO.I.H.G.S.X.
0.3443.60.96Contig624_atContig624--3e-3At2g31390pfkB-type carbohydrate kinase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.999.1GSM71156Morex stress and unstress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
6.998.3GSM130803JA, biological rep1GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
5.397.4GSM71140OWB-D stress replicate 2GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
4.296.3GSM130804JA, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
4.296.3GSM130802salinity stress, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
4.296.3GSM71154Morex stress and unstress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
3.995.8GSM146375Maythorpe shoot Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.995.8GSM130800control, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
3.895.7GSM71141OWB-D stress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
3.795.5GSM130799control, biological rep1GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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