Co-expression analysis

Gene ID Contig19284_at
Gene name
Homology with ArabidopsisSimilar to At1g48410: AGO1 (ARGONAUTE 1) (HF=2e-20)
Module size 6 genes
NF 0.49
%ile 68.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.97Contig19284_atContig19284--2e-20At1g48410AGO1 (ARGONAUTE 1)O.I.H.G.S.X.
0.5066.90.96Contig14904_atContig14904--2e+0At2g28330unknown proteinO.I.H.G.S.X.
0.5066.90.96Contig13468_atContig13468--2e+0At2g33850unknown proteinO.I.H.G.S.X.
0.4762.20.96HV_CEa0010M13r2_s_atHV_CEa0010M13r2--9e-1At4g01670unknown proteinO.I.H.G.S.X.
0.3647.10.97Contig9449_s_atContig9449--3e-18At2g27350OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.3342.60.96Contig13164_atContig13164--2e+0At5g60553-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.498.1GSM16082619% SWC rep3GSE6990Barley drought stressLink to GEO
5.497.5GSM16082319% SWC rep1GSE6990Barley drought stressLink to GEO
4.696.8GSM440968Stressed palea_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.496.6GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.296.3GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.296.3GSM440962Stressed lemma_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.995.8GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
3.895.7GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.394.6GSM440973Stressed awn_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.294.3GSM440974Stressed awn_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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