Co-expression analysis

Gene ID	Contig19246_at
Gene name
Homology with Arabidopsis	Similar to At4g38980: unknown protein (HF=5e+0)
Module size	6 genes
NF	0.25
%ile	31.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	66.9	0.81	Contig19246_at	Contig19246	-	-	5e+0	At4g38980	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.88	HVSMEn0017O06r2_at	HVSMEn0017O06r2	-	-	6e-2	At1g44980	pectinesterase family protein	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.83	HVSMEn0024A10r2_at	HVSMEn0024A10r2	-	-	4e+0	At2g18660	EXLB3 (EXPANSIN-LIKE B3 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.27	32.1	0.81	Contig25334_at	Contig25334	-	-	4e-1	At2g19640	ASHR2 (ASH1-RELATED PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.20	21.1	0.81	Contig25927_at	Contig25927	-	-	5e+0	At5g42130	mitochondrial substrate carrier family protein	O.I.	H.G.	S.X.	Please select
0.17	16.9	0.83	Contig15206_at	Contig15206	-	-	3e-2	At5g46610	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.2	99.0	GSM372999	genotype: 11542 - pathogen isolates: K1 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.0	96.0	GSM372990	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.8	95.7	GSM373001	genotype: 11542 - pathogen isolates: K1 - time: 20 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.4	94.8	GSM372976	genotype: 11542 - pathogen isolates: 5874 - time: 0 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.2	94.3	GSM372998	genotype: 11542 - pathogen isolates: K1 - time: 16 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.2	94.3	GSM373004	genotype: 11542 - pathogen isolates: K1 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.2	94.3	GSM68901	27 h control replicate 1	GSE3097	Barley1 salinity stress study
3.1	94.1	GSM372975	genotype: 11542 - pathogen isolates: 5874 - time: 0 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.1	94.1	GSM372974	genotype: 11542 - pathogen isolates: 5874 - time: 0 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.0	93.8	GSM161148	7% SWC rep3	GSE6990	Barley drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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